{"id":94,"date":"2020-12-28T14:32:13","date_gmt":"2020-12-28T14:32:13","guid":{"rendered":"https:\/\/dsrc.haifa.ac.il\/?p=94"},"modified":"2023-09-25T11:23:26","modified_gmt":"2023-09-25T11:23:26","slug":"harnessing-data-science-to-track-invasive-insects","status":"publish","type":"post","link":"https:\/\/dsrc.haifa.ac.il\/?p=94","title":{"rendered":"Harnessing data science to track invasive insects"},"content":{"rendered":"\t\t<div data-elementor-type=\"wp-post\" data-elementor-id=\"94\" class=\"elementor elementor-94\" data-elementor-post-type=\"post\">\n\t\t\t\t\t\t<section data-particle_enable=\"false\" data-particle-mobile-disabled=\"false\" class=\"elementor-section elementor-top-section elementor-element elementor-element-ec2dbf7 elementor-section-boxed elementor-section-height-default elementor-section-height-default\" data-id=\"ec2dbf7\" data-element_type=\"section\" data-e-type=\"section\" data-settings=\"{&quot;jet_parallax_layout_list&quot;:[]}\">\n\t\t\t\t\t\t<div class=\"elementor-container elementor-column-gap-default\">\n\t\t\t\t\t<div class=\"elementor-column elementor-col-100 elementor-top-column elementor-element elementor-element-d70bdd5\" data-id=\"d70bdd5\" data-element_type=\"column\" data-e-type=\"column\">\n\t\t\t<div class=\"elementor-widget-wrap elementor-element-populated\">\n\t\t\t\t\t\t<div class=\"elementor-element elementor-element-34e87e4 elementor-invisible elementor-widget elementor-widget-heading\" data-id=\"34e87e4\" data-element_type=\"widget\" data-e-type=\"widget\" data-settings=\"{&quot;_animation&quot;:&quot;fadeInUp&quot;,&quot;_animation_mobile&quot;:&quot;fadeInUp&quot;}\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h2 class=\"elementor-heading-title elementor-size-default\">Harnessing data science to track invasive insects\n\n<\/h2>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t<section data-particle_enable=\"false\" data-particle-mobile-disabled=\"false\" class=\"elementor-section elementor-top-section elementor-element elementor-element-f6231d0 elementor-section-boxed elementor-section-height-default elementor-section-height-default\" data-id=\"f6231d0\" data-element_type=\"section\" data-e-type=\"section\" data-settings=\"{&quot;jet_parallax_layout_list&quot;:[]}\">\n\t\t\t\t\t\t<div class=\"elementor-container elementor-column-gap-default\">\n\t\t\t\t\t<div class=\"elementor-column elementor-col-100 elementor-top-column elementor-element elementor-element-e027c06\" data-id=\"e027c06\" data-element_type=\"column\" data-e-type=\"column\">\n\t\t\t<div class=\"elementor-widget-wrap elementor-element-populated\">\n\t\t\t\t\t\t<div class=\"elementor-element elementor-element-a9afe5d elementor-invisible elementor-widget elementor-widget-heading\" data-id=\"a9afe5d\" data-element_type=\"widget\" data-e-type=\"widget\" data-settings=\"{&quot;_animation&quot;:&quot;fadeInUp&quot;,&quot;_animation_mobile&quot;:&quot;fadeInUp&quot;}\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h2 class=\"elementor-heading-title elementor-size-default\">Tamar Keasar# and Avi Bar Massada - Department of Biology and  Environment<\/h2>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-f3f73cb elementor-widget-divider--view-line elementor-widget elementor-widget-divider\" data-id=\"f3f73cb\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"divider.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"elementor-divider\">\n\t\t\t<span class=\"elementor-divider-separator\">\n\t\t\t\t\t\t<\/span>\n\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t<section data-particle_enable=\"false\" data-particle-mobile-disabled=\"false\" class=\"elementor-section elementor-top-section elementor-element elementor-element-eee321b elementor-section-boxed elementor-section-height-default elementor-section-height-default\" data-id=\"eee321b\" data-element_type=\"section\" data-e-type=\"section\" data-settings=\"{&quot;jet_parallax_layout_list&quot;:[]}\">\n\t\t\t\t\t\t<div class=\"elementor-container elementor-column-gap-default\">\n\t\t\t\t\t<div class=\"elementor-column elementor-col-100 elementor-top-column elementor-element elementor-element-1234cb4e\" data-id=\"1234cb4e\" data-element_type=\"column\" data-e-type=\"column\">\n\t\t\t<div class=\"elementor-widget-wrap elementor-element-populated\">\n\t\t\t\t\t\t<section data-particle_enable=\"false\" data-particle-mobile-disabled=\"false\" class=\"elementor-section elementor-inner-section elementor-element elementor-element-a208d82 elementor-section-boxed elementor-section-height-default elementor-section-height-default\" data-id=\"a208d82\" data-element_type=\"section\" data-e-type=\"section\" data-settings=\"{&quot;jet_parallax_layout_list&quot;:[]}\">\n\t\t\t\t\t\t<div class=\"elementor-container elementor-column-gap-default\">\n\t\t\t\t\t<div class=\"elementor-column elementor-col-33 elementor-inner-column elementor-element elementor-element-5a984bd\" data-id=\"5a984bd\" data-element_type=\"column\" data-e-type=\"column\">\n\t\t\t<div class=\"elementor-widget-wrap elementor-element-populated\">\n\t\t\t\t\t\t<div class=\"elementor-element elementor-element-90adacd elementor-widget elementor-widget-text-editor\" data-id=\"90adacd\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p><strong>Machine Learning<br \/>Deep learning<br \/>Neural Networks<br \/><\/strong><\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t<div class=\"elementor-column elementor-col-33 elementor-inner-column elementor-element elementor-element-ab28a8c\" data-id=\"ab28a8c\" data-element_type=\"column\" data-e-type=\"column\">\n\t\t\t<div class=\"elementor-widget-wrap elementor-element-populated\">\n\t\t\t\t\t\t<div class=\"elementor-element elementor-element-ccf51be elementor-widget__width-initial elementor-widget elementor-widget-text-editor\" data-id=\"ccf51be\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p><strong>Biodiversity<\/strong><\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t<div class=\"elementor-column elementor-col-33 elementor-inner-column elementor-element elementor-element-f306772\" data-id=\"f306772\" data-element_type=\"column\" data-e-type=\"column\">\n\t\t\t<div class=\"elementor-widget-wrap elementor-element-populated\">\n\t\t\t\t\t\t<div class=\"elementor-element elementor-element-6fba48a elementor-widget__width-initial elementor-widget elementor-widget-text-editor\" data-id=\"6fba48a\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p><strong>Database Collection Grant 2020<\/strong><\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t<div class=\"elementor-element elementor-element-36da88c4 elementor-hidden-tablet elementor-hidden-mobile elementor-widget elementor-widget-text-editor\" data-id=\"36da88c4\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p><img fetchpriority=\"high\" decoding=\"async\" class=\" alignleft size-full wp-image-93\" style=\"margin-right: 10px; float: left;\" src=\"https:\/\/dsrc.haifa.ac.il\/wp-content\/uploads\/2020\/12\/keasar.png\" alt=\"keasar\" width=\"296\" height=\"259\" srcset=\"https:\/\/dsrc.haifa.ac.il\/wp-content\/uploads\/2020\/12\/keasar.png 596w, https:\/\/dsrc.haifa.ac.il\/wp-content\/uploads\/2020\/12\/keasar-300x262.png 300w\" sizes=\"(max-width: 296px) 100vw, 296px\" \/><\/p><p>A sticky trap for insect monitoring, placed on a eucalypt (left), and after removal and initial insect identification (right). The two insects of interest were manually labeled (\u2018A\u2019 and \u2018B\u2019) in the trap image, for training of the deep learning model. Photo by Achiad Sviri.<\/p><p>Insects are everywhere, profoundly impact human lives, and are also dramatically affected by human activities. Unfortunately, our knowledge about insect population trends and locations is generally poor, and often only descriptive. This limits our ability to predict insect outbreaks, migrations or declines, and to plan our farms, cities and conservation policies accordingly. Identifying insects in large quantities and with high precision is difficult and time-consuming, generating a bottleneck in data collection. To open this bottleneck, this research combins a \u201clow-tech\u201d method for capturing flying insects with an image processing technology that automatically and rapidly identifies and counts individual insects.<\/p><p>Over the last year, <span style=\"text-decoration: underline;\"><strong><a href=\"http:\/\/sciences.haifa.ac.il\/newsci\/main\/index.php\/en\/bioinformatics\/12-department-of-biology-oranim\/91-tamar-keasar\">Tamar Keasar<\/a><\/strong><\/span> and <span style=\"text-decoration: underline;\"><strong><a href=\"http:\/\/sciences.haifa.ac.il\/newsci\/main\/index.php\/en\/faculty-oranim?id=80\">Avi Bar-Massada<\/a><\/strong><\/span> from the department of Biology at Oranim, and members of the University of Haifa&#8217;s\u00a0<span style=\"text-decoration: underline;\"><strong><a href=\"index.php\/news-events\/hackathon\/artathon-2019\">Data Science Research Center<\/a><\/strong><\/span>, used this approach to monitor a sap-sucking insect and its natural enemy, a tiny wasp. Both insects are of Australian origin, and have recently invaded eucalypt forests in Israel. The sap-feeder damages the forest trees, while the wasp preys on it and may be able to reduce its populations.\u00a0<\/p><p>The researchers are capturing the insects using sticky traps placed in the forests (see photos above). A Convolutional Neural Network identifies the insects from photo images of the traps, and measures their body sizes. Their deep learning model currently discriminates the two insects from one another, as well as from other elements such as leaves and other insects, with &gt; 90% accuracy. Based on these data, they will predict the future distribution of the forest pest in Israel, and suggest management strategies to reduce its populations.<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-2fa978a elementor-hidden-desktop elementor-widget elementor-widget-text-editor\" data-id=\"2fa978a\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p><img decoding=\"async\" class=\"size-full wp-image-93 aligncenter\" style=\"margin-right: 10px; float: left;\" src=\"https:\/\/dsrc.haifa.ac.il\/wp-content\/uploads\/2020\/12\/keasar.png\" alt=\"keasar\" width=\"296\" height=\"259\" srcset=\"https:\/\/dsrc.haifa.ac.il\/wp-content\/uploads\/2020\/12\/keasar.png 596w, https:\/\/dsrc.haifa.ac.il\/wp-content\/uploads\/2020\/12\/keasar-300x262.png 300w\" sizes=\"(max-width: 296px) 100vw, 296px\" \/><\/p><p>\u00a0<\/p><p>\u00a0<\/p><p>\u00a0<\/p><p>\u00a0<\/p><p>\u00a0<\/p><p>\u00a0<\/p><p>A sticky trap for insect monitoring, placed on a eucalypt (left), and after removal and initial insect identification (right). The two insects of interest were manually labeled (\u2018A\u2019 and \u2018B\u2019) in the trap image, for training of the deep learning model. Photo by Achiad Sviri.<\/p><p>Insects are everywhere, profoundly impact human lives, and are also dramatically affected by human activities. Unfortunately, our knowledge about insect population trends and locations is generally poor, and often only descriptive. This limits our ability to predict insect outbreaks, migrations or declines, and to plan our farms, cities and conservation policies accordingly. Identifying insects in large quantities and with high precision is difficult and time-consuming, generating a bottleneck in data collection. To open this bottleneck, this research combins a \u201clow-tech\u201d method for capturing flying insects with an image processing technology that automatically and rapidly identifies and counts individual insects.<\/p><p>Over the last year, <span style=\"text-decoration: underline;\"><strong><a href=\"http:\/\/sciences.haifa.ac.il\/newsci\/main\/index.php\/en\/bioinformatics\/12-department-of-biology-oranim\/91-tamar-keasar\">Tamar Keasar<\/a><\/strong><\/span> and <span style=\"text-decoration: underline;\"><strong><a href=\"http:\/\/sciences.haifa.ac.il\/newsci\/main\/index.php\/en\/faculty-oranim?id=80\">Avi Bar-Massada<\/a><\/strong><\/span> from the department of Biology at Oranim, and members of the University of Haifa&#8217;s\u00a0<span style=\"text-decoration: underline;\"><strong><a href=\"index.php\/news-events\/hackathon\/artathon-2019\">Data Science Research Center<\/a><\/strong><\/span>, used this approach to monitor a sap-sucking insect and its natural enemy, a tiny wasp. Both insects are of Australian origin, and have recently invaded eucalypt forests in Israel. The sap-feeder damages the forest trees, while the wasp preys on it and may be able to reduce its populations.\u00a0<\/p><p>The researchers are capturing the insects using sticky traps placed in the forests (see photos above). A Convolutional Neural Network identifies the insects from photo images of the traps, and measures their body sizes. Their deep learning model currently discriminates the two insects from one another, as well as from other elements such as leaves and other insects, with &gt; 90% accuracy. Based on these data, they will predict the future distribution of the forest pest in Israel, and suggest management strategies to reduce its populations.<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t<section data-particle_enable=\"false\" data-particle-mobile-disabled=\"false\" class=\"elementor-section elementor-top-section elementor-element elementor-element-5d80518 elementor-section-boxed elementor-section-height-default elementor-section-height-default\" data-id=\"5d80518\" data-element_type=\"section\" data-e-type=\"section\" data-settings=\"{&quot;jet_parallax_layout_list&quot;:[]}\">\n\t\t\t\t\t\t<div class=\"elementor-container elementor-column-gap-default\">\n\t\t\t\t\t<div class=\"elementor-column elementor-col-100 elementor-top-column elementor-element elementor-element-60af045\" data-id=\"60af045\" data-element_type=\"column\" data-e-type=\"column\">\n\t\t\t<div class=\"elementor-widget-wrap elementor-element-populated\">\n\t\t\t\t\t\t<div class=\"elementor-element elementor-element-7b298cf elementor-widget elementor-widget-spacer\" data-id=\"7b298cf\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"spacer.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"elementor-spacer\">\n\t\t\t<div class=\"elementor-spacer-inner\"><\/div>\n\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t<\/div>\n\t\t","protected":false},"excerpt":{"rendered":"<p>Tamar Keasar, Avi Bar Massada<\/p>\n","protected":false},"author":2,"featured_media":93,"comment_status":"open","ping_status":"open","sticky":false,"template":"elementor_header_footer","format":"standard","meta":{"_acf_changed":false,"_eb_attr":"","footnotes":""},"categories":[85,31,82,63,64,66,23],"tags":[56,34,58],"class_list":["post-94","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-85","category-biodiversity","category-database-collection","category-deep-learning","category-machine-learning","category-neural-networks","category-research-blog","tag-deep-learning","tag-machine-learning","tag-neural-networks","entry","has-media"],"acf":[],"aioseo_notices":[],"aioseo_head":"\n\t\t<!-- All in One SEO 4.9.10 - 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